Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name CG2906
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG2906 (FBgn0033240).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -10.5634 -7.8138 -10.320811 -6.8058 -16.654047 -7.8975 -13.54223 -13.473326
    Affimetrix absolute value 5.023 4.658 4.847 5.638 4.741 5.588 4.798 4.547
    Affymetric present call in "x" number of chips 2 1 0 3 1 3 3 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: metal ion binding; nucleic acid binding; hydrolase activity, hydrolyzing O-glycosyl compounds.
An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: carbohydrate metabolic process.
4 alleles are reported.
No phenotypic data is available.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: DNA/RNA non-specific endonuclease; Glycoside hydrolase, family 1; Regulator of chromosome condensation, RCC1.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression.
Peak expression observed within 00-18 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in adult female stages.
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