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Gene name | CG8078 | ||||||||||||||||||||||||||||||||||||
Flybase description | This gene is referred to in FlyBase by the symbol Dmel\CG8078 (FBgn0033375). | ||||||||||||||||||||||||||||||||||||
Expression data along the gut |
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Intestinal gene expression in different physiological conditions |
Ecc15: flies orally infected with Erwinia carotovora carotovora 15. Pe: flies orally infected with Pseudomonas entomophila. Pe gacA: flies orally infecte with Pseudomonas entomophila gacA. For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe. |
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Gene details (from Flybase) | It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: tRNA binding; ATP binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: tRNA thio-modification. 2 alleles are reported. The phenotypes of these alleles are annotated with: mesothoracic tergum; tormogen cell. It has one annotated transcript and one annotated polypeptide. Protein features are: 2-thiocytidine tRNA biosynthesis protein, TtcA; Rossmann-like alpha/beta/alpha sandwich fold; Uncharacterised protein family UPF0021, conserved site; tRNA 2-thiolation protein; tRNA(Ile)-lysidine/2-thiocytidine synthase. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages. . |