Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name CG13349
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG13349 (FBgn0033886).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 2.2663 2.7261 1.820816 1.7972 1.22776 1.4079 0.48073 1.560463
    Affimetrix absolute value 9.583 9.064 9.025 9.224 9.045 9.041 8.721 8.851
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: endopeptidase activator activity.
There is experimental evidence that it is involved in the biological process: lateral inhibition.
3 alleles are reported.
The phenotype of these alleles is annotated with: intersegmental nerve.
It has 5 annotated transcripts and 5 annotated polypeptides.
Protein features are: 26S proteasome complex ubiquitin receptor, subunit Rpn13.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression.
Peak expression observed within 00-06 hour embryonic stages, during late larval stages, during early pupal stages.
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