Flygut: an atlas of the Drosophila adult midgut

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Gene name CG13426
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG13426 (FBgn0034510).
Expression data along the gut
    Created with Highcharts 6.0.3Fold change compared to full gutRegion-specific expression of CG13426 along the gutCropCardia/R1R2R3R4R5Hindgut-1.5-1-0.500.511.5Highcharts.com
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -48.1076 -27.5605 -40.032202 -47.3547 -62.16497 -50.3767 -48.69878 -42.321148
    Affimetrix absolute value 2.821 2.848 2.868 2.831 2.821 2.909 2.962 2.864
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Created with Highcharts 6.0.3Fold change compared toUnchallengedFold change compared to UnchallengedExpression of CG13426 in different experimental conditionsEcc15 4hEcc15 16hPe 4hPe 16hPe gacA 4hPe gacA 16h-2-1012Highcharts.com
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: protein transporter activity.
Based on sequence similarity, it is predicted to be involved in the biological process: SRP-dependent cotranslational protein targeting to membrane, translocation.
2 alleles are reported.
The phenotype of these alleles is annotated with: mesothoracic tergum.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Protein translocase SEC61 complex, gamma subunit; Protein translocase SecE domain; Protein translocase complex, SecE/Sec61-gamma subunit.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of no expression detected.
Peak expression observed at stages throughout the pupal period, in adult male stages.
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