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Gene name | CG5414 | ||||||||||||||||||||||||||||||||||||
Flybase description | This gene is referred to in FlyBase by the symbol Dmel\CG5414 (FBgn0036569). | ||||||||||||||||||||||||||||||||||||
Expression data along the gut |
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Intestinal gene expression in different physiological conditions |
Ecc15: flies orally infected with Erwinia carotovora carotovora 15. Pe: flies orally infected with Pseudomonas entomophila. Pe gacA: flies orally infecte with Pseudomonas entomophila gacA. For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe. |
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Gene details (from Flybase) | It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: isoleucine-tRNA ligase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: isoleucyl-tRNA aminoacylation. 2 alleles are reported. The phenotype of these alleles is annotated with: trichogen cell. It has one annotated transcript and one annotated polypeptide. Protein features are: Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; Aminoacyl-tRNA synthetase, class I, conserved site; Aminoacyl-tRNA synthetase, class Ia; Isoleucyl-tRNA synthetase; Isoleucyl-tRNA synthetase, type 1; Rossmann-like alpha/beta/alpha sandwich fold; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed within 00-06 and 12-18 hour embryonic stages, during early larval stages, during late pupal stages, in adult female stages. . |