Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name CG3397
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG3397 (FBgn0037975).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -41.0447 -13.0693 -13.774775 -38.6898 -39.741937 -46.4641 -48.86518 -23.630715
    Affimetrix absolute value 3.055 3.915 4.509 3.12 3.454 3.03 2.943 3.711
    Affymetric present call in "x" number of chips 0 3 3 2 1 2 1 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: oxidoreductase activity.
Based on sequence similarity, it is predicted to be involved in the biological process: potassium ion transport.
One allele is reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Aldo/keto reductase; Aldo/keto reductase subgroup; NADP-dependent oxidoreductase domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of very low expression.
Peak expression observed during late larval stages, during early pupal stages.
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