Flygut: an atlas of the Drosophila adult midgut

 Mouche Logo lab lemaitre Bbcf logo
Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name RpI12
Flybase description The gene RpI12 is referred to in FlyBase by the symbol Dmel\RpI12 (CG13418, FBgn0038903).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -5.3077 -4.5731 -5.757277 -5.1414 -7.835854 -6.8251 -5.99824 -5.905459
    Affimetrix absolute value 6.008 5.448 5.685 6.03 5.802 5.792 5.974 5.709
    Affymetric present call in "x" number of chips 3 3 3 2 3 3 3 2
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: DNA-directed RNA polymerase activity.
It is reported to be involved in the biological process: transcription from RNA polymerase I promoter.
2 alleles are reported.
The phenotypes of these alleles are annotated with: trichogen cell; mesothoracic tergum.
It has one annotated transcript and one annotated polypeptide.
Protein features are: DNA-directed RNA polymerase M, 15kDa subunit, conserved site; DNA-directed RNA polymerase, subunit C11/M/9; Zinc finger, TFIIS-type.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression.
Peak expression observed during early larval stages.
.