Flygut: an atlas of the Drosophila adult midgut

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Search expression data by gene:
Gene name Cad96Cb
Flybase description The gene Cad96Cb is referred to in FlyBase by the symbol Dmel\Cad96Cb (CG13664, FBgn0039294).
Expression data along the gut
    Created with Highcharts 6.0.3Fold change compared to full gutRegion-specific expression of Cad96Cb along the gutCropCardia/R1R2R3R4R5Hindgut-1.25-1-0.75-0.5-0.250Highcharts.com
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -57.2767 -32.7685 -47.147752 -52.6215 -70.345463 -59.1298 -59.66396 -49.605188
    Affimetrix absolute value 2.58 2.607 2.642 2.682 2.629 2.677 2.661 2.689
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Created with Highcharts 6.0.3Fold change compared toUnchallengedFold change compared to UnchallengedExpression of Cad96Cb in different experimental conditionsEcc15 4hEcc15 16hPe 4hPe 16hPe gacA 4hPe gacA 16h-2-1012Highcharts.com
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: calcium ion binding.
There is experimental evidence that it is involved in the biological process: open tracheal system development.
9 alleles are reported.
No phenotypic data is available.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: Cadherin; Cadherin conserved site; Cadherin-like.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression.
Peak expression observed within 06-18 hour embryonic stages, during late pupal stages.
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