Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name CG6142
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG6142 (FBgn0039415).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -32.5916 -20.6508 -27.269631 -34.4609 -47.580528 -42.3712 -33.06763 -34.319529
    Affimetrix absolute value 3.397 3.273 3.409 3.283 3.191 3.163 3.518 3.169
    Affymetric present call in "x" number of chips 0 1 1 1 0 1 2 1
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: choline dehydrogenase activity; flavin adenine dinucleotide binding.
An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: oxidation-reduction process; alcohol metabolic process.
2 alleles are reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Glucose-methanol-choline oxidoreductase; Glucose-methanol-choline oxidoreductase, C-terminal; Glucose-methanol-choline oxidoreductase, N-terminal.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression.
Peak expression observed within 18-24 hour embryonic stages.
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