Flygut: an atlas of the Drosophila adult midgut

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Gene name CG11898
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG11898 (FBgn0039645).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -27.6177 -10.2052 -10.835955 -17.3847 -8.397331 -28.8611 -28.98701 -11.297036
    Affimetrix absolute value 3.64 4.277 4.813 4.268 5.7 3.715 3.694 4.821
    Affymetric present call in "x" number of chips 0 3 3 3 3 0 0 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: xenobiotic-transporting ATPase activity; drug transmembrane transporter activity.
An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: transmembrane transport.
3 alleles are reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: ABC transporter, conserved site; ABC transporter, integral membrane type 1; ABC transporter, transmembrane domain; ABC transporter, transmembrane domain, type 1; ABC transporter-like; ATPase, AAA+ type, core.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of low expression to a trough of no expression detected.
Peak expression observed within 18-24 hour embryonic stages, during late larval stages, in stages of adults of both sexes.
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