Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name pasha
Flybase description The gene partner of drosha is referred to in FlyBase by the symbol Dmel\pasha (CG1800, FBgn0039861).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -11.7618 -7.2741 -9.492482 -11.3279 -14.771174 -12.1805 -11.40269 -12.806654
    Affimetrix absolute value 4.871 4.768 4.945 4.898 4.904 4.962 5.041 4.608
    Affymetric present call in "x" number of chips 1 2 2 3 2 1 2 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: double-stranded RNA binding.
There is experimental evidence that it is involved in the biological process: primary miRNA processing; gene silencing by miRNA; imaginal disc growth.
18 alleles are reported.
The phenotypes of these alleles are annotated with: trichogen cell; mesothoracic tergum; imaginal disc; embryonic/larval optic lobe.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Double-stranded RNA-binding; Double-stranded RNA-binding-like.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression.
Peak expression observed within 00-06 hour embryonic stages.
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