Flygut: an atlas of the Drosophila adult midgut

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Gene name Cka
Flybase description The gene Connector of kinase to AP-1 is referred to in FlyBase by the symbol Dmel\Cka (CG7392, FBgn0044323).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -2.541 0.4249 -0.480354 -0.4267 -2.203456 -1.778 -1.32071 -2.066975
    Affimetrix absolute value 7.07 7.738 7.999 8.266 7.657 7.741 8.154 7.277
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: protein binding.
There is experimental evidence that it is involved in the biological process: dorsal closure; compound eye photoreceptor development; positive regulation of JNK cascade; phagocytosis, engulfment.
16 alleles are reported.
The phenotypes of these alleles are annotated with: embryonic/first instar larval cuticle; imaginal disc; head.
It has 6 annotated transcripts and 6 annotated polypeptides.
Protein features are: G-protein beta WD-40 repeat; Striatin, N-terminal; WD40 repeat; WD40 repeat 2; WD40 repeat, conserved site; WD40 repeat, subgroup; WD40 repeat-like-containing domain; WD40-repeat-containing domain; WD40/YVTN repeat-like-containing domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression.
Peak expression observed within 00-18 hour embryonic stages, during early pupal stages, in adult male stages.
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