Flygut: an atlas of the Drosophila adult midgut

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Gene name CG30196
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG30196 (FBgn0050196).
Expression data along the gut
    Created with Highcharts 6.0.3Fold change compared to full gutRegion-specific expression of CG30196 along the gutCropCardia/R1R2R3R4R5Hindgut-2024Highcharts.com
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -5.0885 -10.0499 -18.362712 -18.4017 -24.43926 -15.3394 -15.94757 -16.769038
    Affimetrix absolute value 6.078 4.347 4.023 4.205 4.17 4.643 4.558 4.191
    Affymetric present call in "x" number of chips 3 1 1 2 1 2 2 1
Intestinal gene expression in different physiological conditions
Created with Highcharts 6.0.3Fold change compared toUnchallengedFold change compared to UnchallengedExpression of CG30196 in different experimental conditionsEcc15 4hEcc15 16hPe 4hPe 16hPe gacA 4hPe gacA 16h-2-1012Highcharts.com
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
The biological processes in which it is involved are not known.
2 alleles are reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: LPS-induced tumor necrosis factor alpha factor.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of no expression detected.
Peak expression observed within 12-24 hour embryonic stages, at stages throughout the larval period.
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