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| Gene name | Trim9 | ||||||||||||||||||||||||||||||||||||
| Flybase description | The gene Trim9 is referred to in FlyBase by the symbol Dmel\Trim9 (CG31721, FBgn0051721). | ||||||||||||||||||||||||||||||||||||
| Expression data along the gut |
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| Intestinal gene expression in different physiological conditions |
Ecc15: flies orally infected with Erwinia carotovora carotovora 15. Pe: flies orally infected with Pseudomonas entomophila. Pe gacA: flies orally infecte with Pseudomonas entomophila gacA. For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe. |
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| Gene details (from Flybase) | It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: zinc ion binding. There is experimental evidence that it is involved in the biological process: axon guidance; axon midline choice point recognition; neurogenesis. 13 alleles are reported. The phenotypes of these alleles are annotated with: midline crossing tract; trichogen cell; dopaminergic neuron; wing. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: B-box, C-terminal; B30. 2/SPRY domain; COS domain; Concanavalin A-like lectin/glucanase; Fibronectin type III domain; Fibronectin, type III; Immunoglobulin-like fold; SPla/RYanodine receptor SPRY; Zinc finger, B-box; Zinc finger, RING-type; Zinc finger, RING/FYVE/PHD-type. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 06-18 hour embryonic stages. . |
