Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name Rtnl1
Flybase description The gene Rtnl1 is referred to in FlyBase by the symbol Dmel\Rtnl1 (CG33113, FBgn0053113).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 9.355 18.6362 11.14173 9.9193 4.233662 3.778 8.34094 8.618195
    Affimetrix absolute value 11.615 11.784 11.615 11.674 10.806 10.478 11.598 11.22
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
There is experimental evidence that it is involved in the biological process: inter-male aggressive behavior; olfactory behavior.
32 alleles are reported.
No phenotypic data is available.
It has 11 annotated transcripts and 11 annotated polypeptides.
Protein features are: Reticulon.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of high expression.
Peak expression observed within 00-18 hour embryonic stages, during late pupal stages.
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