Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name Shroom
Flybase description The gene Shroom is referred to in FlyBase by the symbol Dmel\Shroom (CG34379, FBgn0085408).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -42.4355 -20.3673 -28.709477 -37.8838 -42.780759 -41.0038 -44.7654 -31.001247
    Affimetrix absolute value 3.025 3.289 3.358 3.156 3.362 3.204 3.074 3.304
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions There is not condition-dependent expression data available for this gene.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: actin binding.
There is experimental evidence that it is involved in the biological process: cell morphogenesis.
18 alleles are reported.
The phenotypes of these alleles are annotated with: embryonic leading edge cell primordium; epithelial cell; dorsal ectoderm.
It has 3 annotated transcripts and 3 annotated polypeptides.
Protein features are: Apx/shroom, ASD2.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression.
Peak expression observed within 00-06 and 12-24 hour embryonic stages, during late larval stages, during early pupal stages.
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