Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name spin
Flybase description The gene spinster is referred to in FlyBase by the symbol Dmel\spin (CG8428, FBgn0086676).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 1.9013 3.4637 1.478929 2.3535 0.291427 1.3109 2.94747 1.676278
    Affimetrix absolute value 9.331 9.401 8.723 9.599 8.714 8.943 10.085 8.944
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
There is experimental evidence for 14 unique biological process terms, many of which group under: biological regulation; localization; system development; cellular component organization or biogenesis; multicellular organism reproduction; multicellular organismal development; synaptic transmission; regulation of programmed cell death; gamete generation; glial cell differentiation; membrane organization; programmed cell death.
65 alleles are reported.
The phenotypes of these alleles are annotated with 14 unique terms, many of which group under: organ system; multicellular structure; organ system subdivision; anatomical structure; non-connected developing system; adult; imaginal precursor; cytoplasmic part; synapse; external compound sense organ.
It has 5 annotated transcripts and 5 annotated polypeptides.
Protein features are: Major facilitator superfamily; Major facilitator superfamily domain; Major facilitator superfamily domain, general substrate transporter.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression.
Peak expression observed within 00-06 hour embryonic stages, in adult male stages.
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