Flygut: an atlas of the Drosophila adult midgut

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Gene name Spf45
Flybase description The gene Spf45 is referred to in FlyBase by the symbol Dmel\Spf45 (CG17540, FBgn0086683).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -1.5952 1.1153 -0.427935 -1.2536 -1.242105 -1.3431 -2.03942 -1.343523
    Affimetrix absolute value 7.745 7.775 8.051 8.077 8.446 8.139 7.535 7.828
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions There is not condition-dependent expression data available for this gene.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: nucleotide binding; nucleic acid binding.
There is experimental evidence that it is involved in the biological process: DNA repair; regulation of alternative nuclear mRNA splicing, via spliceosome.
5 alleles are reported.
The phenotype of these alleles is annotated with: trichogen cell.
It has 3 annotated transcripts and 3 annotated polypeptides.
Protein features are: D111/G-patch; Nucleotide-binding, alpha-beta plait; RNA recognition motif domain; Splicing factor, SPF45.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression.
Peak expression observed within 00-12 hour embryonic stages.
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