Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name SelD
Flybase description The gene Selenide,water dikinase is referred to in FlyBase by the symbol Dmel\SelD (CG8553, FBgn0261270).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -1.6839 -1.2926 -1.199376 -1.7578 -1.995517 -1.9627 -1.89417 -1.576622
    Affimetrix absolute value 7.68 7.251 7.918 7.579 7.768 7.612 7.644 7.596
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: selenide, water dikinase activity.
There is experimental evidence that it is involved in the biological process: selenocysteine biosynthetic process; imaginal disc development; positive regulation of cell proliferation; cell proliferation; negative regulation of reactive oxygen species metabolic process; glutamine metabolic process; mitochondrion organization; neurogenesis.
13 alleles are reported.
The phenotypes of these alleles are annotated with: trichogen cell; mesothoracic tergum; wing; imaginal disc; embryonic/larval brain; embryonic/larval optic lobe; wing vein.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: AIR synthase-related protein; AIR synthase-related protein, C-terminal; PurM, N-terminal-like; Selenide water dikinase.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression.
Peak expression observed within 00-12 hour embryonic stages, in adult female stages.
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