Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name scra
Flybase description The gene scraps is referred to in FlyBase by the symbol Dmel\scra (CG2092, FBgn0261385).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -36.2805 -14.5791 -14.575797 -18.792 -17.885322 -15.5981 -30.2276 -17.629536
    Affimetrix absolute value 3.251 3.774 4.323 4.191 4.61 4.683 3.637 4.137
    Affymetric present call in "x" number of chips 0 3 3 3 3 3 1 2
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: actin binding; microtubule binding.
There is experimental evidence for 12 unique biological process terms, many of which group under: cellular component organization or biogenesis; cellular process; system development; sensory organ development; multicellular organismal development; cell cycle; cell cycle process; anatomical structure formation involved in morphogenesis; biological regulation; sensory organ precursor cell division; membrane organization; organelle organization; regulation of nucleocytoplasmic transport.
32 alleles are reported.
The phenotypes of these alleles are annotated with 15 unique terms, many of which group under: sense organ; organ system; scolopidium; organ system subdivision; multicellular structure; non-connected developing system; organelle; intercellular bridge; cellular component organization or biogenesis; cytoplasmic part; scolopidial ligament cell.
It has 3 annotated transcripts and 3 annotated polypeptides.
Protein features are: Pleckstrin homology domain; Pleckstrin homology-type.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of low expression.
Peak expression observed within 00-12 hour embryonic stages.
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